Genomic analysis of Agrobacterium radiobacter DSM 30147T and emended description of A. radiobacter (Beijerinck and van Delden 1902) Conn 1942 (Approved Lists 1980) emend. Sawada et al. 1993

نویسندگان

  • Linshuang Zhang
  • Xiangyang Li
  • Feng Zhang
  • Gejiao Wang
چکیده

Agrobacterium radiobacter is the only known non-phytopathogenic species in Agrobacterium genus. In this study, the whole-genome sequence of A. radiobacter type strain DSM 30147(T) was described and compared to the other available Agrobacterium genomes. This bacterium has a genome size of 7,122,065 bp distributed in 612 contigs, including 6,834 protein-coding genes and 41 RNA genes. It harbors a circular chromosome and a linear chromosome but not a tumor-inducing (Ti) plasmid. To the best of our knowledge, this is the first report of a genome from the A. radiobacter species. In addition, an emended description of A. radiobacter is described. This study reveals information that enhances the current understanding of its non-phytopathogenicity and its phylogenetic position within Agrobacterium genus.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

A revision of Rhizobium Frank 1889, with an emended description of the genus, and the inclusion of all species of Agrobacterium Conn 1942 and Allorhizobium undicola de Lajudie et al. 1998 as new combinations: Rhizobium radiobacter, R. rhizogenes, R. rubi, R. undicola and R. vitis.

Rhizobium, Agrobacterium and Allorhizobium are genera within the bacterial family Rhizobiaceae, together with Sinorhizobium. The species of Agrobacterium, Agrobacterium tumefaciens (syn. Agrobacterium radiobacter), Agrobacterium rhizogenes, Agrobacterium rubi and Agrobacterium vitis, together with Allorhizobium undicola, form a monophyletic group with all Rhizobium species, based on comparative...

متن کامل

Stages in the Life History of Phytomonas tumefaciens.

Phytomonas tumefaciens, the root nodule organisms, and other related bacterial species may produce, in the course of their life histories, peculiar, star-shaped aggregates of cells. Beijerinck (1890) and Beijerinck and van Delden (1902) were apparently the first to describe this phenomenon. Working with the root nodule bacteria and Alcaligenes radiobacter these investigators interpreted this ph...

متن کامل

Chromate Reduction by Resting Cells of Agrobacterium radiobacter EPS-916.

Resting cells of Agrobacterium radiobacter EPS-916 grown on glucose, fructose, maltose, lactose, mannitol, or glycerol reduced 0.5 mM chromate. However, resting cells of strain EPS-916 grown on glutamate or succinate did not reduce chromate. The ability of washed cells to reduce chromate was correlated with their redox potential.

متن کامل

Recovery of a strain of Agrobacterium radiobacter with a mucoid phenotype from an immunocompromised child with bacteremia.

Agrobacteria are associated more commonly with plant than with human disease. The isolation of Agrobacterium radiobacter from blood cultures of an immunocompromised child with a transcutaneous catheter prompted a review of human infections caused by Agrobacterium species. Only 12 reports describing 19 cases of Agrobacterium infections in humans have appeared in the literature. Sixteen of the pa...

متن کامل

Biological Control of Crown Gall : Construction and Testing of New Biocontrol Agents

Shim, J.-S., Farrand, S. K., and Kerr, A. 1987. Biological control of crown gall: Construction and testing of new biocontrol agents. Phytopathology 77:463-466. Transfer deficient (Tra-) Tn5 insertion mutants of the agrocin 84 plasmid strain K84 in controlling crown gall. Strains of Agrobacterium radiobacter pAgK84 were transformed into two chromosomal backgrounds and the which contained a high ...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:

دوره 9  شماره 

صفحات  -

تاریخ انتشار 2014